1+MG Partner projects are committed supporting the implementation of 1+MG Roadmap by delivering specific components during a specific timeframe. These components will come together to build the 1+MG infrastructure that will facilitate the transnational access to 1+MG genomes by the 2022.
1+MG Partner Projects will be entitled to display the 1+MG logo on their websites. There is also the expectation that they will be actively involved in project discussion and meetings, according to their actual contribution to the 1+MG Roadmap.
Projects interested in applying can use this form.
Coordinator: Thomas Keane (EMBL-EBI)
| WG |
1+MG Infrastructure |
Contribution |
Next steps |
Timeline |
| 5 |
Data Discovery |
Federated discovery across registry services by Beacon |
Expand cohorts; Align with ELIXIR Beacon network and 1+MG (WG5) |
Q4 2021 |
| 5 |
Cohort harmonisation |
Minimal metadata model for international cohorts |
Cross querying (an)other EC project and IHCC |
Q4 2021 |
| 5 |
Storage & Interfaces |
GA4GH interfaces for cohort data access |
Generating multiple synthetic cohort datasets that can be used to test infrastructure |
Q2 2021 |
| 5 |
Data Access Mechanisms |
GA4GH researcher ID specifications implemented in ELIXIR and CanDIG AAI |
Demonstrate a Permissions API to enable data access; Implement in 1 site in the FEGA |
Q4 2021 |
| 5 |
Federated Analysis |
Federated research and clinical applications |
Initial PoC for applications in 2021 |
Q4 2022 |
WG = Working Group
Coordinator: Daria Julkowska (INSERM)
| WG |
1+MG Infrastructure |
Contribution |
Next steps |
Timeline |
| 5 |
Data Discovery |
Record level querying via Beacon |
PoC for EJP RD needed by year, align with the PoC for 1+MG (WG5) |
Q4 2021 |
| 5 |
Data Reception |
Best practices in sharing and linking phenotypic and genetic data for RD |
Direct contribution by EJP RD experts on scoping papers (WG3, WG4) |
Q2 2021 |
| 5 |
Storage & Interfaces |
EGA to RD-Connect connections |
Practical level discussion on tools that are needed (WG5) |
Q2 2021 |
| 5 |
Data Access Mechanisms |
Distributed consent management |
EGA and CNAG will support GA4GH Passport, Visa and AAI specifications |
Q3 2021 |
| 5 |
Processing |
RD-Connect GPAP in Virtual Platform for data analysis |
Practical level discussion on tools that are needed (WG5) |
Q2 2021 |
WG = Working Group
Coordinator: Niklas Blomberg (ELIXIR)
| WG |
1+MG Infrastructure |
Contribution |
Next steps |
Timeline |
| 5 |
Data Discovery |
Data discovery with the ELIXIR Beacon Network |
Report of use-cases and architecture for the EGA federation |
Q2 2021 |
| 5 |
Data Reception |
Minimal metadata model for infectious diseases (COVID-19) related datasets |
COVID-19 metadata mapping model across COVID-19 studies in FEGA |
Q2 2021 |
| 5 |
Storage & Interfaces |
Driving the implementation of FEGA nodes, with a focus on infectious diseases use case |
Report of use-cases and architecture for the EGA federation |
Q2 2021 |
| 5 |
Data Access Mechanisms |
Use ELIXIR AAI, which is aligned with the DURI Work Stream of GA4GH |
Report of use-cases and architecture for the EGA federation |
Q2 2021 |
| 5 |
Processing |
Cross border data processing operations and processes for FEGA COVID-19 datasets |
Report operational processes across the FEGA network and data transfer with the European COVID-19 platform |
Q4 2021 |
WG = Working Group
Find out more