1+MG Partner projects are committed supporting the implementation of 1+MG Roadmap by delivering specific components during a specific timeframe. These components will come together to build the 1+MG infrastructure that will facilitate the transnational access to 1+MG genomes by the 2022.
1+MG Partner Projects will be entitled to display the 1+MG logo on their websites. There is also the expectation that they will be actively involved in project discussion and meetings, according to their actual contribution to the 1+MG Roadmap.
Projects interested in applying can use this form .
CINECA
Coordinator: Thomas Keane (EMBL-EBI)
WG
1+MG Infrastructure
Contribution
Next steps
Timeline
5
Data Discovery
Federated discovery across registry services by Beacon
Expand cohorts; Align with ELIXIR Beacon network and 1+MG (WG5)
Q4 2021
5
Cohort harmonisation
Minimal metadata model for international cohorts
Cross querying (an)other EC project and IHCC
Q4 2021
5
Storage & Interfaces
GA4GH interfaces for cohort data access
Generating multiple synthetic cohort datasets that can be used to test infrastructure
Q2 2021
5
Data Access Mechanisms
GA4GH researcher ID specifications implemented in ELIXIR and CanDIG AAI
Demonstrate a Permissions API to enable data access; Implement in 1 site in the FEGA
Q4 2021
5
Federated Analysis
Federated research and clinical applications
Initial PoC for applications in 2021
Q4 2022
WG = Working Group
EJP RD
Coordinator: Daria Julkowska (INSERM)
WG
1+MG Infrastructure
Contribution
Next steps
Timeline
5
Data Discovery
Record level querying via Beacon
PoC for EJP RD needed by year, align with the PoC for 1+MG (WG5)
Q4 2021
5
Data Reception
Best practices in sharing and linking phenotypic and genetic data for RD
Direct contribution by EJP RD experts on scoping papers (WG3, WG4)
Q2 2021
5
Storage & Interfaces
EGA to RD-Connect connections
Practical level discussion on tools that are needed (WG5)
Q2 2021
5
Data Access Mechanisms
Distributed consent management
EGA and CNAG will support GA4GH Passport, Visa and AAI specifications
Q3 2021
5
Processing
RD-Connect GPAP in Virtual Platform for data analysis
Practical level discussion on tools that are needed (WG5)
Q2 2021
WG = Working Group
ELIXIR CONVERGE
Coordinator: Niklas Blomberg (ELIXIR)
WG
1+MG Infrastructure
Contribution
Next steps
Timeline
5
Data Discovery
Data discovery with the ELIXIR Beacon Network
Report of use-cases and architecture for the EGA federation
Q2 2021
5
Data Reception
Minimal metadata model for infectious diseases (COVID-19) related datasets
COVID-19 metadata mapping model across COVID-19 studies in FEGA
Q2 2021
5
Storage & Interfaces
Driving the implementation of FEGA nodes, with a focus on infectious diseases use case
Report of use-cases and architecture for the EGA federation
Q2 2021
5
Data Access Mechanisms
Use ELIXIR AAI, which is aligned with the DURI Work Stream of GA4GH
Report of use-cases and architecture for the EGA federation
Q2 2021
5
Processing
Cross border data processing operations and processes for FEGA COVID-19 datasets
Report operational processes across the FEGA network and data transfer with the European COVID-19 platform
Q4 2021
WG = Working Group
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